Spiderday (#14)

Here is the latest edition of SPIDERDAY! A perfect spot to check out the best ‘web’ links related to Arachnids. It’s sure to catch you…

From Alex Wild, a lovely amblypygid.

From Alex Wild, a lovely amblypygid. Like that image? Here are more of his arachnid photos.

SpiderAnatomy101

JunkOff_SpiderStyle

 

Vouchers? What vouchers? Revealing a crisis in arthropod-based research

Here’s a hypothetical scenario:

Q: “Hey I see you published a paper that shows the wolf spider Trochosa ruricola occurs up in the Ottawa Valley - I didn’t realize it had reached that far. It’s an invasive species, so tracking its distribution is quite important

A: “Yeah, we too were surprised it was up that far: to our knowledge, only Trochosa terricola was in that part of Ontario

Q: “It is tricky to tell apart those two species! What museum did you deposit specimens in? I’d like to take a look at them to verify the identification.

A: “Um, we didn’t get around to depositing specimens in the museum. There might still be some in the lab. I’ll have to get back to you...”

Not cool. And also much too common.

Bottom line: when specimen-based research is done with arthropods, whether it is a biodiversity inventory, a community ecology study, or a taxonomic revision, the researchers must deposit voucher specimens in a research museum or institutional collection. This is only way to truly verify that the work is accurate, that people are calling things by the same name, and it puts a stamp in time for the research. Without deposition of these voucher specimens (somewhere that is publicly accessible and curated, and along with data about time, place and collector) the research cannot be verified, and this goes against the principle of repeatability in science.

Beetles in drawers: a great example of specimens in a curated museum, and shows how such specimens can be used for all kind of research!

Beetles in drawers: a great example of specimens in a curated museum, and shows how such specimens can be used for all kind of research!

This is a no-brainer, right? It’s time to test whether or not scientists actually bother to deposit voucher specimens…. As part of a graduate-level* class in Entomology last winter, we surveyed the literature to find out the frequency of voucher deposition with arthropod-based research. We looked at papers to see what percentage actually report on vouchers, assessed whether the frequency of voucher deposition varied by research type, study organisms, institution (of researcher), and whether voucher deposition has changed over time.

We published the results a few weeks ago, in the Open Access journal PeerJ, and our work has revealed a crisis in arthropod-based research. Overall, rates of voucher specimen deposition were very low, as only 25% of papers report on the deposition of voucher specimens. This is horrible, and essentially means that the specimens from the majority of papers published cannot be traced to a collection, and cannot be verified.

Some disciplines were worse than others, as crustacean researchers deposited vouchers only 6% of the time, as compared to the relatively higher rate of voucher deposition by entomologists, at 46%. Here is a summary of the main findings:

The main findings of our research: the asterisk illustrates a significant difference relative to a global mean.

The main findings of our research: the asterisk illustrates a significant difference relative to a global mean. Figure from our paper, published here.

Is there any good news? Perhaps so… when looking at rate of voucher deposition over time, more papers are reporting about vouchers in 2014 (35%) compared to 1989 (below 5%).

At the end of our paper we provide some conclusions and recommendations, and these are repeated here:

  1. PIs must be responsible and proactive on the process of voucher specimen deposition, from the start of any project.
  2. Graduate students need to be mentored appropriately about the importance of voucher specimen deposition.
  3. It needs to be recognized that voucher specimens are important for all branches of arthropod research - there is no reason that entomologists should do better than, say, crustacean biologists.
  4. Close collaboration between Universities/Research Centres and Museums is required, so that there is an agreed up, and easy process for all researchers to deposit vouchers.
  5. Everyone involved with arthropod-based research needs to work together to push for long-term, sustainable funding for institutional collections/museums so that proper curation of vouchers can be done.
  6. Publishers and editorial boards need to have clear policies about voucher specimens, so that any papers published are required to report on vouchers.

I recognize that the title of this post is provocative. Is it *really* a crisis?

I think it is: I think that even the best rate of voucher deposition that we report on is too low. We must aim to be closer to 100%. It’s important as we work to describe the world’s biodiversity, understand what is happening to our species in the face of climate change, or track the distribution of invasive species. It’s important that our hard work is more than a publication: our hard work is often a specimen, and that specimen needs to be accessible for future generations.

Voucher for critters than need to be stored in liquids looks something like this.

Voucher for critters than need to be stored in liquids looks something like this.

Reference:

Turney S, Cameron ER, Cloutier CA, Buddle CM. (2015) Non-repeatable science: assessing the frequency of voucher specimen deposition reveals that most arthropod research cannot be verified. PeerJ 3:e1168 https://dx.doi.org/10.7717/peerj.1168

* A most sincere thanks to my graduate students Shaun, Elyssa and Chris - these students did the lion’s share of this project, and took on this graduate class with great enthusiasm, maturity and motivation. You all inspire me!

Spiderday (#13)

After a busy summer, and a lot of time away, I’m pleased to start up Spiderday again. Here are some arachnid-themed links pulled from the web over the past couple of weeks.

Here's a nice looking spider - it's a Selenops. There is exciting new research about these critters! (photo by Sean McCann)

Here’s a nice looking spider - it’s a Selenops. There is exciting new research about these critters! (photo by Sean McCann)

  • The photo, above, provides a segue to my read of the week: some species of neotropical spiders don’t just ‘fall’ from trees, they can ‘glide’ and use their flat bodies as a type of sail to redirect them to the tree trunks. Wow…. just WOW. Here’s one take on this story, and here’s the original paper.
  • Nice spiders finish last - and determine the fate of the colony. Some really neat research about colonial spiders.
  • Tooting my own horn here: I was thrilled to see quite a lot of interest about our research on the effects of insecticides on jumping spider personalities.
  • Here is a Festschrift of interest: The life and times of Africa’s First Lady of Arachnology, Ansie Dippenaar-Schoeman.
  • Male wolf spiders do some eavesdropping. 
  • Another tiny dancer (peacock spiders…. of course!)
  • If you don’t follow the Biodiversity Heritage Library, you really should. Case in point:

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Curiosity, passion and science: On the natural history of an Arctic pseudoscorpion

I’m pleased to announce a publication about the natural history of a tiny, wonderful arachnid: the pseudoscorpion Wyochernes asiaticus.

The Arctic pseudoscorpion Wyochernes asiaticus (copyright C. Ernst, reproduced here with permission)

The Arctic pseudoscorpion Wyochernes asiaticus (photo by C. Ernst, reproduced here with permission)

I’ve published quite a few papers, but this one is really special: it’s special because it’s about an obscure creature for which virtually *nothing* was known. It’s about a species with a fascinating distribution. To me, it’s an epic tale about a species that nobody really cares that much about. It’s special because it is research that was done just out of pure curiosity and fascination: there was no larger purpose, no great problem to solve, and no experiments to run*. It was based on observation and observation alone, and it was a long slog - done over many, many years (it took about 7-8 years to pull together this story, and this story is really only a prologue). Fundamentally this research was about trying to gather some base-line data about a small animal living in a big landscape.

The big landscape: A river above the Arctic circle: our pseudscorpion friend can be found under the rocks alongside this river.

The big landscape: A river above the Arctic circle: our pseudscorpion friend can be found under the rocks alongside this river.

This work presents some life-history data about a fascinating northern pseudoscorpion species, occurring only in the north-west of North America. As far as I know, it occurs only in regions that were primarily unglaciated during the last glaciation event which covered pretty much all of the northern half of the continent. However, unlike other Beringian species (e.g., the wooly mammoth), this little arachnid did not go extinct but rather continues to thrive in its somewhat unusual habitat under rocks, near rivers or streams.

After collecting and measuring nearly 600 specimens, I can now tell you a bit more about the species distribution in North America, and provide some insights into its life history traits. For example, larger females tended to have higher clutch sizes, a very common and well-known pattern with other arachnids, but there was certainly a paucity of data about this for pseudoscorpions. I also know that all its life stages can be collected in the Yukon in July, and that females can carry around quite a few young (over a dozen!).

But that’s about it. Beyond those fundamental life history measurements and comments on its distribution, the bulk of the species biology remains a mystery.

It may be possible to look at this work as a failure. Heck - a LOT of specimens were collected, by many, many enthusiastic helpers. It took some resources to get the work done (although it was mostly through stealth). A lot of time was spent at the microscope, and it certainly took a bit of time to pull together the paper. And what for? We still don’t know very much about the species: how does it disperse? How does it overwinter? How does it survive flooding of its habitat? How restrictive are the habitat affinities of the species? Do females and males tend to hang around the same rock, or do they mill about with others? What does it eat?

I don’t see this as frustrating, or discouraging, because it’s a start. Before thinking about bigger questions in ecology and evolution, your first need some basics. Only then is it possible to ask broader questions about, say, phylogeography, dispersal limitation, or behaviour.

I hope this work encourages others to seek out and discover new and interesting things about the unnoticed species that walk underfoot, live in tree-tops, swamps, or beneath park benches.

The Arctic pseudoscorpion, Wyochernes asiaticus

Another image of the Arctic pseudoscorpion, Wyochernes asiaticus taken during the 2015 field season

I was very pleased to publish this work in the Canadian Field-Naturalist. Sure, it’s not a ‘high impact’ journal, but it’s a rather special and unique journal for being an excellent location to publish work on the natural history of our species. I hope others consider this journal as an outlet for their curiosity-driven science. Over time, I hope the pendulum does swing, and as a scientific community we really embrace the value of “basic” natural history data. Without a fundamental working knowledge of our species we are hamstrung when it comes to solving the big environmental challenges facing our planet. It’s time to play catch-up. Let’s worry less about impact factors and show some love for smaller journals that are brave enough to keep on publishing about natural history. Let’s spend time observing our natural world, collecting interesting data just because.

I ended my paper with a paragraph about what it felt like to do this research. I am so thankful the editors allowed me to keep this paragraph. It’s important, and reflects my long-standing belief that the lines between a subjective love of nature, and objective observations about nature, should be blurred. They certainly are for me.

In conclusion, observing these marvelous animals in one of the most beautiful areas of the planet, was gratifying, awe-inspiring, and helped solidify a love of natural history. What has been learned is only the prologue to a truly astounding epic: many more discoveries await.

——-

*Please check out this amazing blog post about the value of ‘observation’ to ecology. It relates closely to what I have written.

© C.M. Buddle (2015)

Spiderday (#12)

I’m delighted to bring you the twelfth instalment of SPIDERDAY! All your arachnid links, at your fingertips!

Please note: I’m going to be away (vacation time…) for part of August - your next Spiderday will likely be on 22 August. Hope you can wait that long!

From Jonathan Kolby, an awesome net-casting spider! Amazing animals.

From Jonathan Kolby, an awesome net-casting spider! Amazing animals.

  • in New Zealand, here’s a post about mites that may prove to be important biological control agents against wasps. Mite-y powerful!
  • On damselflies and mites: Regionally widespread parasitic water mites have relatively broad host species ranges. Nifty paper!
  • An unlucky Opiliones:

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